why coding strand is so important?

Everything on bioinformatics, the science of information technology as applied to biological research.

Moderators: Leonid, amiradm, BioTeam

Post Reply
bioinfo
Garter
Garter
Posts: 33
Joined: Wed Sep 15, 2010 8:00 am

why coding strand is so important?

Post by bioinfo » Mon Dec 13, 2010 11:54 am

i want to creat program for transcription .
I know programming but confusion is that what should change means
which sequence should taken as query from NCBI.
then what basepair should change
1) T to U or
2) "A" to "U","C" to "G" and so on(Complementary)

which way is true.
In NCBI seq. are coding or template.



If NCBI contains coding strand then why?
Because as per my knowledge transcription is done from template strand.
Are all fasta nucleotide sequence files has sequences of coding strand??
&what is about genomic seq. files???
Last edited by bioinfo on Thu Dec 16, 2010 11:05 am, edited 2 times in total.

User avatar
JackBean
Inland Taipan
Inland Taipan
Posts: 5694
Joined: Mon Sep 14, 2009 7:12 pm

Re: Perl programming

Post by JackBean » Mon Dec 13, 2010 12:26 pm

wright? Wrights are dangerous! :twisted: :lol:

Anyway, the DNA sequences at databases are of coding strand, AKA they have the same sequence as transcript except of T/U (this is not that much about programming;)
http://www.biolib.cz/en/main/

Cis or trans? That's what matters.

Post Reply

Who is online

Users browsing this forum: No registered users and 1 guest