Compare different eukaryotic genomes

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steven777
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Compare different eukaryotic genomes

Post by steven777 » Sun Feb 21, 2010 3:37 pm

Can someone please help me on this

Thank you very much

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JackBean
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Post by JackBean » Sun Feb 21, 2010 4:15 pm

help me on WHAT? :roll: Oh mein Got! That's like written by some **** :twisted: :twisted: :twisted:
http://www.biolib.cz/en/main/

Cis or trans? That's what matters.

steven777
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Post by steven777 » Sun Feb 21, 2010 5:14 pm

Compare different eukaryotic genomes?

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JackBean
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Post by JackBean » Sun Feb 21, 2010 5:35 pm

Which genomes? How do you want to compare them? By what criteria?

You don't only want us to do your work, but you can't even ask for it :roll:
http://www.biolib.cz/en/main/

Cis or trans? That's what matters.

steven777
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Re: Compare different eukaryotic genomes

Post by steven777 » Sun Feb 21, 2010 5:49 pm

Never mind thanx anyways

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JackBean
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Post by JackBean » Sun Feb 21, 2010 6:05 pm

:roll: Just answer my questions.
http://www.biolib.cz/en/main/

Cis or trans? That's what matters.

steven777
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Post by steven777 » Sun Feb 21, 2010 6:20 pm

well the the question is given to me is Compare different eukaryotic genomes so i am assuming that it can be any 2 or 3 eukaryotic genome comparsion.

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JackBean
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Post by JackBean » Sun Feb 21, 2010 6:37 pm

Well, than look for e.g. Saccharomyces, rice and duckbill and look for: size of genome (in Gbp), number of chromosomes, GC content...
http://www.yeastgenome.org/cache/genomeSnapshot.html
http://rice.plantbiology.msu.edu/riceInfo/info.shtml
http://www.genome.gov/12512287

So, you will have all three kingdoms. Of course, you may want to pick some other (which won't have like everybody;), recently has been published maize genome or my favourite Anolis :) http://www.genome.gov/Pages/Research/Se ... torSeq.pdf
or choose some e.g. here http://www.genome.gov/10002154 or here http://www.genomenewsnetwork.org/resour ... e_p1.shtml
http://www.biolib.cz/en/main/

Cis or trans? That's what matters.

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JackBean
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Post by JackBean » Sun Feb 21, 2010 6:39 pm

The table _at_ SGD can be good guide for you for the criteria (e.g. No. of ORFs etc.)
http://www.biolib.cz/en/main/

Cis or trans? That's what matters.

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