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Reading frame

reading frame

One of the three possible ways of reading a nucleotide sequence. As the genetic code is read in nonoverlapping triplets (codons) there are three possible ways of translating a sequence of nucleotides into a protein, each with a different starting point. For example: given the nucleotide sequence: AGCAGCAGC, the three reading frames are: AGC AGC AGC, GCA GCA, CAG CAG.


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Re: Why must we avert the genome of Eden?

... are not a trusted source of information, so nobody wants to sit their reading all of the information you have put forth. It is better to provide ... should reasonably expect to see this accumulation, given the Darwinian framework. ) A compelling starting point could be the genome of a sponge. ...

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by wildfunguy
Fri Oct 04, 2013 7:49 pm
 
Forum: Evolution
Topic: Why must we avert the genome of Eden?
Replies: 6
Views: 7131

Sequencing question/primer design

... me. 1) Design a forward primer for XXX gene sequence that is in frame (in frame as in the Open reading frame w/ ATG?) and removes the signal peptide. Additionally, does XXX gene have a lipoprotein ...

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by coppcw08
Sun Nov 04, 2012 8:19 pm
 
Forum: Molecular Biology
Topic: Sequencing question/primer design
Replies: 4
Views: 3108

Can I deduce the Number of Proteins Produced?

I have a question given to me, reading: Calculate the number of proteins with an average molecular weight of 90,000 ... that are coded by a genome assuming that 80% of the a genome contain open reading frames. The average molecular weight of an amino acid is 50 Da and that every amino ...

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by blah484
Thu Jun 28, 2012 3:53 pm
 
Forum: Genetics
Topic: Can I deduce the Number of Proteins Produced?
Replies: 1
Views: 2110

Theories - Origin of Life

... classification system until it is clear that one is necessary. After reading more on this particular example, it seems that there are many different ... reproductive isolation? One possibility is the limited time frame for their divergence, given that most freshwater populations were colonized ...

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by AstraSequi
Tue Mar 27, 2012 2:41 am
 
Forum: Evolution
Topic: Theories - Origin of Life
Replies: 560
Views: 888129

what is six-frames translation

... are coded by triplets, right? So for sequence ACTGACACAAGTTGACA the reading could be ACT GAC ACA AGT TGA CA but if we skip the first nucleotide ... do the same for reverse complement sequence and get 3*2 = 6 reading frames. Usage? As genetherapy wrote, when you do not know, which reading ...

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by JackBean
Mon Mar 19, 2012 1:33 pm
 
Forum: Molecular Biology
Topic: what is six-frames translation
Replies: 3
Views: 5847
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