Dictionary » N » Networks

Networks

network

1. A fabric of threads, cords, or wires crossing each other at certain intervals, and knotted or secured at the crossings, thus leaving spaces or meshes between them.

2. Any system of lines or channels interlacing or crossing like the fabric of a net; as, a network of veins; a network of railroads.


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miRNA-mediated competing endogenous RNAs (ceRNAs) networks

ceRNABase have constructed pan-cancer ceRNA networks from tumor miRNA and mRNA expression profiles (TCGA 14 cancer types with >6000 tumor and normal samples). For example: known PTEN-ZEB2 ceRNA interactions can be supported in 13 cancer types .

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by rnaworld2110
Mon Mar 03, 2014 11:42 am
 
Forum: Cell Biology
Topic: miRNA-mediated competing endogenous RNAs (ceRNAs) networks
Replies: 2
Views: 3014

Pan-Cancer pattern of lncRNAs, miRNAs, mRNAs

... cancer types. Pan-Cancer miRNA and lncRNA resources: (1) panCancerMine : explore Pan-Cancer pattern lncRNA, miRNA, mRNA and their regulatory networks (ceRNA, coexpression) by mining expression profiles of miRNAs, lncRNAs and mRNAs across 14 cancer types (>6000 samples) from The Cancer ...

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by rnaworld2110
Thu Feb 06, 2014 11:56 am
 
Forum: Molecular Biology
Topic: Pan-Cancer pattern of lncRNAs, miRNAs, mRNAs
Replies: 1
Views: 1062

miRNA-mediated competing endogenous RNAs (ceRNAs) networks

... CLIP-supported miRNA target sites. provided ceRNAFunction tool to predict the functions of lncRNAs and protein-coding genes from ceRNA regulatory networks. website: http://starbase.sysu.edu.cn/mrnaCeRNA.php 2. Competing endogenous RNA database : predicted ceRNA candidates from genome. website: ...

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by rnaworld2110
Sun Dec 15, 2013 9:29 am
 
Forum: Cell Biology
Topic: miRNA-mediated competing endogenous RNAs (ceRNAs) networks
Replies: 2
Views: 3014

Re: Comprehensive List of long noncoding RNA(lncRNA) databases

... novel lncRNA resources have been published: (1) lncRNABase , for decoding miRNA-lncRNA(lncRNAs, circRNAs, pseudogenes) and miRNA-ceRNA interaction networks from CLIP-Seq datasets. website: http://starbase.sysu.edu.cn/mirLncRNA.php (2) LncRNADisease – a database for long-non-coding RNA-associated ...

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by rnaworld2110
Thu Nov 21, 2013 4:38 pm
 
Forum: Molecular Biology
Topic: Comprehensive List of long noncoding RNA(lncRNA) databases
Replies: 2
Views: 2429

miRNA-lncRNA interaction databases

... interactions were listed as follows: (1) starBase v2.0 ( http://starbase.sysu.edu.cn ) is designed for decoding miRNA-lncRNA interaction networks and ceRNA regulatory networks involving lncRNAs and mRNAs from 108 CLIP-Seq (HITS-CLIP, PAR-CLIP, iCLIP, CLASH) datasets. (2) DIANA-LncBase ...

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by rnaworld2110
Wed Nov 13, 2013 2:52 pm
 
Forum: Molecular Biology
Topic: miRNA-lncRNA interaction databases
Replies: 0
Views: 834
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