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Contig

Contig

group of clones representing overlapping regions of the genome.


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Population Genetics Questions

When you assemble your sequence it looks like you are assembling: under derst rstand anding to get contig = understanding the sequence that does not fit is the reverse complement.

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by Cat
Sat Dec 01, 2012 12:05 am
 
Forum: Genetics
Topic: Population Genetics Questions
Replies: 3
Views: 2013

Population Genetics Questions

... from different genomic clones from one region of the human genome. In the space below the sequences, align the sequences to make a single sequence contig, showing how the sequences overlap. (To make things fit, you may need to write small or wrap around!) NOTE: All six sequences read in a 5’ to ...

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by animus31
Wed Nov 21, 2012 3:36 pm
 
Forum: Genetics
Topic: Population Genetics Questions
Replies: 3
Views: 2013

Re: How do I create the sequence contig of this DNA?

Look for overlapping sequences. For example, Read 1 begins with tattat. Does this sequence occur in any of the other reads?

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by wbla3335
Tue Nov 20, 2012 7:14 pm
 
Forum: Genetics
Topic: How do I create the sequence contig of this DNA?
Replies: 2
Views: 1302

How do I create the sequence contig of this DNA?

... Read 7: atttccattttaacaacaggagaaggagaaggaagagttggtattatcctgactttagccatgaa c. Use these 7 sequence reads to create a sequence contig of this portion of the H. sapiens cDNA. Show clearly how you achieved this. I don't understand what's going on, help me to understand what this ...

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by TToe
Tue Nov 20, 2012 1:41 pm
 
Forum: Genetics
Topic: How do I create the sequence contig of this DNA?
Replies: 2
Views: 1302

searching for gene sequences, automated

... it should be possible to automate this proces? Eg: if someone sequences an entirely new genome, I can hardly imagine they manually enter each contig in the website and search for it... Are their programs out there to automate this?

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by poloke
Wed Jul 11, 2012 12:58 pm
 
Forum: Bioinformatics
Topic: searching for gene sequences, automated
Replies: 8
Views: 3525
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