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by ellenS
Wed May 17, 2017 11:06 am
Forum: Bioinformatics
Topic: Multiple sequence alignment
Replies: 0
Views: 4164

Multiple sequence alignment

Hello everyone! I have a set of bacterial 16SrRNA sequences (about 50 non-coding sequences) that Id like to align in order to reconstruct a phylogenetic tree. I use MUSCLE to make a multiple sequence alignment. My Question is how to treat with the gaps in the MSA? Am I supposed to trim the ends of t...