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Softrware for proteins!

Everything on bioinformatics, the science of information technology as applied to biological research.

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Softrware for proteins!

Postby HELISA » Sat Sep 09, 2006 5:55 pm

Does anyone know the good source of software which allows to predict protein structure after inserting the protein sequence in FASTA format?
Thank you!
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Postby mith » Sun Sep 10, 2006 1:21 am

Dunno if this works but I found it after looking through the links in my professor's webpage http://www.biowiki.org


http://sourceforge.net/projects/proteinshop
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Postby G-Do » Wed Oct 18, 2006 2:34 am

You can try the Robetta server (sadly it is down right now, but I have used it in the past with excellent results):

http://robetta.bakerlab.org/
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Postby cyberpostdoc » Tue Dec 12, 2006 4:52 am

Last edited by cyberpostdoc on Mon Jan 22, 2007 7:22 pm, edited 1 time in total.
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Postby sachin » Tue Dec 12, 2006 2:00 pm

Best Site That I use For same Perpose..

http://www.ncbi.nlm.nih.gov/entrez/query.fcgi

CN3D is NCBI's 3D structure viewer. As a helper application for your Web browser, it allows you to interactively view 3D structures, sequences, and sequence alignments. Cn3D is available for Windows, MacOS, and Unix.

"Rasmol" is NCBI's 3D structure viewer. As a helper application for your Web browser, it allows you to interactively view 3D structures, sequences, and sequence alignments. Cn3D is available for Windows, MacOS, and Unix.

Best views i ve got..
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