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miRNA-lncRNA interaction databases

Discussion of all aspects of biological molecules, biochemical processes and laboratory procedures in the field.

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miRNA-lncRNA interaction databases

Postby rnaworld2110 » Wed Nov 13, 2013 2:52 pm

Long noncoding RNAs (lncRNAs) represent the leading edge of cancer research. However, their identity, function, and dysregulation in various human diseases are only beginning to be understood.
Several papers have revealed lncRNA functions by identifying the regulatory relationships between miRNAs and lncRNAs.

There are two related resources for miRNA-lncRNA interactions were listed as follows:
(1) starBase v2.0 ( http://starbase.sysu.edu.cn ) is designed for decoding miRNA-lncRNA interaction networks and ceRNA regulatory networks involving lncRNAs and mRNAs from 108 CLIP-Seq (HITS-CLIP, PAR-CLIP, iCLIP, CLASH) datasets.

(2) DIANA-LncBase ( http://diana.imis.athena-innovation.gr/ ... Base/index ): miRNA-lncRNA interactions from 1 CLIP-Seq datasets and computationally predictions.
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