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Why so few beta-sheet membrane proteins?Moderator: BioTeam
4 posts • Page 1 of 1
Why so few beta-sheet membrane proteins?Hi all
Why are there so few membrane proteins with beta-sheets? 99% seems to be alfa-helices And the few few that exists, why are they only very complicated beta-barrels? Why not like transmembrane alfa-helices but with beta-sheets /Thanks
Let's start from the end.
The alpha-helices are hold together by H-bonding between consequent amino acids, whereas for beta-sheets you need several beta-strands, which make H-bonds in between each other So, you can have only one helix (not only transmembrane), but you can't have only one beta-strand. Regarding the first question, look for how many amino acids you need to pass through the membrane for helix and how many for beta-strand http://www.biolib.cz/en/main/
Cis or trans? That's what matters.
jack, I think your answer to the former question is wrong, since a beta sheet actually uses less amino acids to cross a membrane than an alpha helix. I think the reason there's more alpha helical proteins is the higher hydrophobicity of the alpha helix compared to the beta sheet
"As a biologist, I firmly believe that when you're dead, you're dead. Except for what you live behind in history. That's the only afterlife" - J. Craig Venter
Re: Why so few beta-sheet membrane proteins?As I remember alpha helices slide past others and they're more convenient for signal transduction or transport...beta barrels are rigid structures...
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4 posts • Page 1 of 1
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