non-redundant primers

[blurcita7]

Hello,

Currently, I'm pushing my brain to learn molecular biology and I want to design some primers to do some PCRs with. Nothing has been done about the genetics of the bird that I worked with so, I made some multiple alignments with the aa sequences of other organisms and found some well conserved regions that may serve as good start. However, I'm stuck about how to design the primers...I've done this before a couple of times just by pasting the entire nucleotide sequence into a software but, now that I have specific regions of interest within that sequence I'm lost...also because I do not know how to find AA sequences that have the least redundancy, so that the primer can be as non-redundant as possible (I'm also not sure of what non-redundant is/means under this context! ) Hope someone could come across with the answers! Thanks in advance...
Another question: is it possible to design the primers using amino acid sequences instead of nucleotide ones?
Cheerio...

[priyajoshi]

BxSeqTools™ is an innovative web-based sequence analysis and molecular cloning software suite. This package contains most commonly used molecular biology tools. BxSeqTools has exceptional data management and sharing capabilities which are not available in competitive products. This system exemplifies seamless integration of data management systems and data analysis tools.

BxChIPSeq provides accurate and highly automated analysis of ChIP-Seq data with novel web technologies and the most reliable statistics algorithms. BioInfoRx utilizes this proprietary program to provide highly reliable data analysis with fast cycle time.

BxArrays™ is BioInfoRx' solution for general microarray data management and online data analysis. This system allows efficient online data management and complete automated analysis of your own data or the deposited data in Gene Expression Omnibus (GEO) website.

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[JackBean]

BxSeqTools™ is an innovative web-based sequence analysis and molecular cloning software suite. This package contains most commonly used molecular biology tools. BxSeqTools has exceptional data management and sharing capabilities which are not available in competitive products. This system exemplifies seamless integration of data management systems and data analysis tools.

BxChIPSeq provides accurate and highly automated analysis of ChIP-Seq data with novel web technologies and the most reliable statistics algorithms. BioInfoRx utilizes this proprietary program to provide highly reliable data analysis with fast cycle time.

BxArrays™ is BioInfoRx' solution for general microarray data management and online data analysis. This system allows efficient online data management and complete automated analysis of your own data or the deposited data in Gene Expression Omnibus (GEO) website.

Please check these software tools for free of cost at bioinfoman.com

Someone is apparently spaming with his link?