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AppleBreed DataBase (DB) aims to store genotypic and phenotypic data from multiple …

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Table 4
- A new versatile database created for geneticists and breeders to link molecular and phenotypic data in perennial crops: the AppleBreed DataBase

Table 4. Content and definition of the GT_DNA_SAMPLE table

Fields	Definition	Remarks

DNA_SAMPLE_ID	DNA sample identifier	PK
DNA_SAMPLE_NAME	Name of the sample
TREE_LABEL	Label of the tree from which the DNA sample was collected	FK to GT_TREE
DATE_LEAF_COL	Date of leaves (sample) collection
COLLECTOR_NAME	Name of the person who collected the sample
ISOLATION_DATE	Date of the DNA sample isolation
ISOLATOR_NAME	Name of the person who isolated the DNA sample
DNA_REF_PROTOCOL	DNA protocol used (file name)	Link to a protocol file
DATA_ENCODE_DATE	Date of data encoding
DATA_ENCODE_NAME	Person who encoded the data
ORIG_PLATE_NB	Original plate identifier
ORIG_PLATE_ROW	Row of the micro-titre plate
ORIG_PLATE_LINE	Line of the micro-titre plate
ORIG_INSTITUTION	Institution that provided the sample	FK to ORG_INSTITUTION
NEW_PLATE_NB	New plate identifier
NEW_PLATE_ROW	New micro-titre plate row	Link to an image file
NEW_PLATE_LINE	New micro-titre plate line
NEW_INSTITUTION	Institution that conducted the sample analysis	FK to ORG_INSTITUTION
REMARKS	Any further remarks on the DNA sample collection and isolation conditions

PK: primary key; FK: foreign key.

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