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AppleBreed DataBase (DB) aims to store genotypic and phenotypic data from multiple …


Biology Articles » Agriculture » Plant Production » A new versatile database created for geneticists and breeders to link molecular and phenotypic data in perennial crops: the AppleBreed DataBase » Table 4

Table 4
- A new versatile database created for geneticists and breeders to link molecular and phenotypic data in perennial crops: the AppleBreed DataBase

Table 4. Content and definition of the GT_DNA_SAMPLE table

Fields Definition Remarks

DNA_SAMPLE_ID DNA sample identifier PK
DNA_SAMPLE_NAME Name of the sample  
TREE_LABEL Label of the tree from which the DNA sample was collected FK to GT_TREE
DATE_LEAF_COL Date of leaves (sample) collection  
COLLECTOR_NAME Name of the person who collected the sample  
ISOLATION_DATE Date of the DNA sample isolation  
ISOLATOR_NAME Name of the person who isolated the DNA sample  
DNA_REF_PROTOCOL DNA protocol used (file name) Link to a protocol file
DATA_ENCODE_DATE Date of data encoding  
DATA_ENCODE_NAME Person who encoded the data  
ORIG_PLATE_NB Original plate identifier  
ORIG_PLATE_ROW Row of the micro-titre plate  
ORIG_PLATE_LINE Line of the micro-titre plate  
ORIG_INSTITUTION Institution that provided the sample FK to ORG_INSTITUTION
NEW_PLATE_NB New plate identifier  
NEW_PLATE_ROW New micro-titre plate row Link to an image file
NEW_PLATE_LINE New micro-titre plate line  
NEW_INSTITUTION Institution that conducted the sample analysis FK to ORG_INSTITUTION
REMARKS Any further remarks on the DNA sample collection and isolation conditions  

PK: primary key; FK: foreign key.


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