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Whole-genome physical maps facilitate genome sequencing, sequence assembly, mapping of candidate genes, …


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Biology Articles » Botany » Plant Pathology » A physical map of the heterozygous grapevine 'Cabernet Sauvignon' allows mapping candidate genes for disease resistance » Table 1

Table 1
- A physical map of the heterozygous grapevine 'Cabernet Sauvignon' allows mapping candidate genes for disease resistance

Features of the 'Cabernet Sauvignon' physical map.

Number of clones fingerprinted
44,544
Number of clones used for map assembly
30,828
Number of singletons
1,111
Number of contigs
1,770
> 200 clones
5
101–200 clones
10
51–100 clones
85
26–50 clones
238
11–25 clones
520
3–10 clones
702
2 clones
210
Unique bands of the contigs
650,622
Physical length of the contigs (Mbp)
715,684
Number of Q clones
2,982
Number of Q contigs
577

The average band size (1.1 kbp) was estimated by dividing the average insert size of the BAC clones by the average number of bands per clone used for fingerprinting. This value was used to estimate the physical length of the contigs.


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