The authors unravelled new important molecular genetic details about fish orthologous DGs

• Abstract
• Background
• Results
• Discussion
• Conclusion
• Methods
• References
• Figures
• Tables

Biology Articles » Zoology » Ichthyology » Duplication of the dystroglycan gene in most branches of teleost fish » References

References

- Duplication of the dystroglycan gene in most branches of teleost fish

1. Ibraghimov-Beskrovnaya O, Ervesti JM, Leveille CJ, Slaughter CA, Sernett CA, Campbell KP: Primary structure of dystrophin-associated glycoproteins linking dystrophin to the extracellular matrix.

   Nature 1992, 355:696-702.

2. Ervasti JM, Campbell KP: A role for the dystrophin-glycoprotein complex as a transmembrane linker between laminin and actin.

   J Cell Biol 1993, 122:809-823.

3. Barresi R, Campbell KP: Dystroglycan: from biosynthesis to pathogenesis of human disease.

   J Cell Sci 2006, 119:199-207.

4. Lunardi A, Dente L: Molecular cloning and expression analysis of dystroglycan during Xenopus laevis embryogenesis.

   Mech Dev 2002, 119:S49-54.

5. Parsons MJ, Campos I, Hirst EM, Stemple DL: Removal of dystroglycan causes severe muscular dystrophy in zebrafish embryos.

   Development 2002, 129:3505-3512.

6. Sgambato A, Brancaccio A: The dystroglycan complex: from biology to cancer.

   J Cell Physiol 2005, 205:163-169.

7. Campbell KP: Three muscular dystrophies: loss of cytoskeleton-extracellular matrix linkage.

   Cell 1995, 80:675-679.

8. Williamson RA, Henry MD, Daniels KJ, Hrstka RF, Lee JC, Sunada Y, Ibraghimov-Beskrovnaya O, Campbell KP: Dystroglycan is essential for early embryonic development: disruption of Reichert's membrane in Dag1-null mice.

   Hum Mol Genet 1997, 6:831-41.

9. Michele DE, Barresi R, Kanagawa M, Saito F, Cohn RD, Satz JS, Dollar J, Nishino I, Kelley RI, Somer H, Straub V, Mathews KD, Moore SA, Campbell KP: Post-translational disruption of dystroglycan-ligand interactions in congenital muscular dystrophies.

   Nature 2002, 418:417-422.

10. Kim DS, Hayashi YK, Matsumoto H, Ogawa M, Noguchi S, Murakami N, Sakuta R, Mochizuki M, Michele DE, Campbell KP, Nonaka I, Nishino I: POMT1 mutation results in defective glycosylation and loss of laminin-binding activity in α-DG.

    Neurology 2004, 62:1009-1011.

11. van Reeuwijk J, Janssen M, van den Elzen C, Beltran-Valero de Bernabe D, Sabatelli P, Merlini L, Boon M, Scheffer H, Brockington M, Muntoni F, Huynen MA, Verrips A, Walsh CA, Barth PG, Brunner HG, van Bokhoven H: POMT2 mutations cause α-dystroglycan hypoglycosylation and Walker-Warburg syndrome.

    J Med Genet 2005, 42:907-912.

12. Muntoni F, Brockington M, Blake DJ, Torelli S, Brown SC: Defective glycosylation in muscular dystrophy.

    Lancet 2002, 360:1419-1421.

13. Guyon JR, Mosley AN, Zhou Y, O'Brien KF, Sheng X, Chiang K, Davison AJ, Volinski JM, Zon LI, Kunkel LM: The dystrophin associated protein complex in zebrafish.

    Human Molecular Genetics 2003, 6:601-615.

14. Guyon JR, Mosley AN, Jun SJ, Montanaro F, Steffen LS, Zhou Y, Nigro V, Zon LI, Kunkel LM: δ-sarcoglycan is required for early zebrafish muscle organization.

    Exp Cell Res 2005, 304:105-115.  

15. Chambers SP, Anderson LV, Maquire GM, Dodd A, Love DR: Sarcoglycans of the zebrafish: orthology and localization to the sarcolemma and myosepta of muscle.

    Biochem Biophys Res Commun 2003, 303:488-495.  

16. Taylor JS, Braasch I, Frickey T, Meyer A, Van de Peer Y: Genome duplication, a trait shared by 22000 species of ray-finned fish.

    Genome Res 2003, 3:382-390.

17. Ervasti JM, Campbell KP: A role for the dystrophin-glycoprotein complex as a transmembrane linker between laminin and actin.

    J Cell Biol 1993, 122:809-823.

18. Losasso C, Di Tommaso F, Sgambato A, Ardito R, Cittadini A, Giardina B, Petrucci TC, Brancaccio A: Anomalous dystroglycan in carcinoma cell lines.

    FEBS lett 2000, 484:1194-1198.

19. Yamada H, Fumiaki Saito, Hiroko FO, Zhong D, Hase A, Arai K, Okuyama A, Maekawa R, Schimizu T, Matsumura K: Processing of β-dystroglycan by matrix metalloproteinase disrupts the link between the extracellular matrix and the cell membrane via the dystroglycan complex.

    Hum Mol Genet 2001, 10:1563-1569.

20. Woods IG, Wilson C, Friedlander B, Chang P, Reyes DK, Nix R, Kelly PD, Chu F, Postlethwait JH, Talbot WS: The zebrafish gene map defines ancestral vertebrate chromosomes.

    Genome Res 2005, 15:1307-1314.

21. Christoffels A, Koh EG, Chia JM, Brenner S, Aparicio S, Venkatesh B: Fugu genome analysis provides evidence for a whole-genome duplication early during the evolution of ray-finned fishes.

    Mol Biol Evol 2004, 21:1146-1151.

22. Lynch M, Conery JS: The evolutionary fate and consequences of duplicate genes.

    Science 2000, 290:1151-1154.

23. Force A, Lynch M, Pickett FB, Amores A, Yan YL, Postlethwait J: Preservation of duplicate genes by complementary, degenerative mutations.

    Genetics 1999, 151:1531-1545.

24. Wittbrodt J, Meyer A, Scharti M: More genes in fish?

    BioEssay 1998, 20:511-515.

25. Liu RZ, Sun Q, Thiesse C, Thiesse B, Wright JM, Denovan-Wright EM: The cellular retinol-binding protein genes are duplicated and differentially transcribed in the developing and adult zebrafish (Danio rerio).

    Mol Biol Evol 2005, 3:469-477.

26. Ibraghimov-Beskrovnaya O, Milatovich A, Ozcelik T, Koepnick K, Francke U, Campbell KP: Human dystroglycan: skeletal muscle cDNA, genomic structure, origin of tissue specific isoforms and chromosomal localization.

    Hum Mol Genet 1993, 2:1651-1657.

27. Kennedy CF, Berget SM: Pyrimidine tracts between the 5' splice site and branch point facilitate splicing and recognition of a small Drosophila intron.

    Mol Cell Biol 1997, 5:2774-2780.

28. Kountikov E, Wilson M, Quiniou S, Miller N, Clem W, Bengten E: Genomic organization of the channel catfish CD45 functional gene and CD45 pseudogenes.

    Immunogenetics 2005, 57:374-83.

29. Roy SW, Gilbert W: The evolution of spliceosomal introns: patterns, puzzles and progress.

    Nat Rev Genet 2006, 7:211-221.

30. Pereboev AV, Ahmed N, thi Man N, Morris GE: Epitopes in the interacting regions of β-dystroglycan (PPxY motif) and dystrophin (WW domain).

    Biochim Biophys Acta 2001, 1527:54-60.

31. Cheng J, Randall A, Sweredoski M, Baldi P: SCRATCH: a protein structure and structural feature prediction server.

    Nucleic Acids Research 2005, 33:72-76.

32. Pollastri G, Przybylski D, Rost B, Baldi P: Improving the prediction of protein secondary structure in three and eight classes using recurrent neural networks and profiles.

    Proteins 2002, 47:228-235.

33. Bozic D, Sciandra F, Lamba D, Brancaccio A: The structure of the N-terminal region of murine skeletal muscle α-dystroglycan discloses a modular architecture.

    J Biol Chem 2004, 279:44812-44816.

34. Sciandra F, Schneider M, Giardina B, Baumgartner S, Petrucci TC, Brancaccio A: Identification of the β-dystroglycan binding epitope within the C-terminal region of β-dystroglycan.

    Eur J Biochem 2001, 268:4590-4597.

35. Bozzi M, Sciandra F, Ferri L, Torreri P, Pavoni E, Petrucci TC, Giardina B, Brancaccio A: Concerted mutation of Phe residues belonging to the β-dystroglycan ectodomain strongly inhibits the interaction with α-dystroglycan in vitro.

    FEBS J 2006, 273:4929-4943.

36. Rosa G, Ceccarini M, Cavaldesi M, Zini M, Petrucci TC: Localization of the dystrophin binding site at the carboxyl terminus of β-dystroglycan.

    Biochem Biophys Res Commun 1996, 223:272-277.

37. Brunet FG, Crollius HR, Paris M, Aury JM, Gibert P, Jaillon O, Laudet V, Robinson-Rechavi M: Gene loss and evolutionary rates following whole-genome duplication in teleost fishes.

    Mol Biol Evol 2006, 23:1808-1816.

38. Guyon JR, Steffen LS, Howell MH, Pusack TJ, Lawrence C, Kunkel LM: Modeling human muscle disease in zebrafish.

    Biochim Biophys Acta 2007, 1772:205-215.

39. Gesemann M, Brancaccio A, Schumacher B, Ruegg MA: Agrin is a high-affinity binding protein of dystroglycan in non-muscle tissue.

    J Biol Chem 1998, 273:600-605.

40. Moll J, Barzaghi P, Lin S, Bezakova G, Lochmuller H, Engvall E, Muller U, Ruegg MA: An agrin minigene rescues dystrophic symptoms in a mouse model for congenital muscular dystrophy.

    Nature 2001, 413:302-307.

41. Fujimura K, Sawaki H, Sakai T, Hiruma T, Nakanishi N, Sato T, Ohkura T, Narimatsu H: LARGE2 facilitates the maturation of α-dystroglycan more effectively than LARGE.

    Biochem Biophys Res Commun 2005, 329:1162-1171.

42. Grewal PK, McLaughlan JM, Moore CJ, Browning CA, Hewitt JE: Characterization of the LARGE family of putative glycosyltransferases associated with dystroglycanopathies.

    Glycobiology 2005, 15:912-23.

43. Thompson JD, Higgins DG, Gibson TJ: CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.

    Nucleic Acids Res 1994, 22:4673-4680.

44. Julenius K, Molgaard A, Gupta R, Brunak S: Prediction, conservation analysis, and structural characterization of mammalian mucin-type O-glycosylation sites.

    Glycobiology 2005, 15:153-164.

45. Pavoni E, Sciandra F, Barca S, Giardina B, Petrucci TC, Brancaccio A: Immunodetection of partially glycosylated isoforms of α-dystroglycan by a new monoclonal antibody against its β-dystroglycan-binding epitope.

    FEBS Lett 2005, 579:493-499.