Login

Join for Free!
17144 members
table of contents table of contents

Bacteriocin-producing lactic acid bacteria are commonly used as natural protective cultures.


Biology Articles » Biotechnology » Detection of the pediocin gene pedA in strains from human faeces by real-time PCR and characterization of Pediococcus acidilactici UVA1 » References

References
- Detection of the pediocin gene pedA in strains from human faeces by real-time PCR and characterization of Pediococcus acidilactici UVA1

  1. Drider D, Fimland G, Hechard Y, McMullen LM, Prévost H: The continuing story of class IIa bacteriocins.

    Microbiol Mol Biol Rev 2006, 70(2):564-582.

  2. Devlieghere F, Vermeiren L, Debevere J: New preservation technologies: Possibilities and limitations.

    Int Dairy J 2004, 14(4):273-285.

  3. Cotter PD, Hill C, Ross RP: Bacteriocins: developing innate immunity for food.

    Nat Rev Microbiol 2005, 3(10):777-788.

  4. Eijsink VGH, Axelsson L, Diep DB, Havarstein LS, Holo H, Nes IF: Production of class II bacteriocins by lactic acid bacteria; an example of biological warfare and communication.

    Antonie Van Leeuwenhoek 2002, 81(1 - 4):639-654.

  5. Rodriguez JM, Martinez MI, Kok J: Pediocin PA-1, a wide-spectrum bacteriocin from lactic acid bacteria.

    Crit Rev Food Sci Nutr 2002, 42(2):91-121.

  6. Henderson JT, Chopko AL, van Wassenaar PD: Purification and primary structure of pediocin PA-1 produced by Pediococcus acidilactici PAC-1.0.

    Arch Biochem Biophys 1992, 295(1):5-12.

  7. Nieto Lozano JC, Meyer JN, Sletten K, Pelaz C, Nes IF: Purification and amino acid sequence of a bacteriocin produced by Pediococcus acidilactici.

    J Gen Microbiol 1992, 138(9):1985-1990.

  8. Carr FJ, Chill D, Maida N: The lactic acid bacteria: a literature survey.

    Crit Rev Microbiol 2002, 28(4):281-370.

  9. Juven BJ, Meinersmann RJ, Stern NJ: Antagonistic effects of lactobacilli and pediococci to control intestinal colonization by human entero-pathogens in live poultry.

    J Appl Bacteriol 1991, 70:95-103.

  10. Kurzak P, Ehrmann MA, Vogel RF: Diversity of lactic acid bacteria associated with ducks.

    Syst Appl Microbiol 1998, 21:588-592.

  11. Hudson JA, Cai Y, Corner RJ, Morvan B, Joblin KN: Identification and enumeration of oleic acid and linoleic acid hydrating bacteria in the rumen of sheep and cows.

    J Appl Microbiol 2000, 88(2):286-292.

  12. Millette M, Dupont C, Archambault D, Lacroix M: Partial characterization of bacteriocins produced by human Lactococcus lactis and Pediococccus acidilactici isolates.

    J Appl Microbiol 2007, 102(1):274-282.

  13. Stewart JA, Chadwick VS, Murray A: Carriage, quantification, and predominance of methanogens and sulfate-reducing bacteria in faecal samples.

    Lett Appl Microbiol 2006, 43(1):58-63.

  14. Maruo T, Sakamoto M, Toda T, Benno Y: Monitoring the cell number of Lactococcus lactis subsp. cremoris FC in human feces by real-time PCR with strain-specific primers designed using the RAPD technique.

    Int J Food Microbiol 2006, 110(1):69-76.

  15. Houde A, Leblanc D, Poitras E, Ward P, Brassard J, Simard C, Trottier YL: Comparative evaluation of RT-PCR, nucleic acid sequence-based amplification (NASBA) and real-time RT-PCR for detection of noroviruses in faecal material.

    J Virol Methods 2006, 135(2):163-172.

  16. Touré R, Kheadr E, Lacroix C, Moroni O, Fliss I: Production of antibacterial substances by bifidobacterial isolates from infant stool active against Listeria monocytogenes.

    J Appl Microbiol 2003, 95(5):1058-1069.

  17. Daba H, Lacroix C, Huang J, Simard RE, Lemieux L: Simple method of purification and sequencing of a bacteriocin produced by Pediococcus acidilactici UL5.

    J Appl Bacteriol 1994, 77(6):682-688.

  18. Halami PM, Ramesh A, Chandrashekar A: Megaplasmid encoding novel sugar utilizing phenotypes, pediocin production and immunity in Pediococcus acidilactici C20.

    Food Microbiol 2000, 17(5):475-483.

  19. de Man JD, Rogosa M, Sharpe ME: A medium for the cultivation of Lactobacilli.

    J Appl Bacteriol 1960, 23:130-135.

  20. Schägger H, von Jagow G: Tricine-sodium dodecyl sulfate-polyacrylamide gel electrophoresis for the separation of proteins in the range from 1 to 100 kDa.

    Anal Biochem 1987, 166(2):368.

  21. Rozen S, Skaletsky HJ: Primer3 on the WWW for general users and for biologist programmers. In Krawetz S, Misener S (eds) Bioinformatics Methods and Protocols: Methods in Molecular Biology. Edited by: Press H. Totowa ; 2000:365-386.

  22. Schürch C: Development of a novel DNA transformation system for bifidobacteria. In Dept of Agricultural and Food Sciences. Zurich , Swiss Federal Institute of Technology; 2002.

  23. Rodriguez JM, Cintas LM, Casaus P, Martinez MI, Suarez A, Hernandez PE: Detection of pediocin PA-1-producing pediococci by rapid molecular biology techniques.

    Food Microbiol 1997, 14(4):363-371.

  24. Marugg JD, Gonzalez CF, Kunka BS, Ledeboer AM, Pucci MJ, Toonen MY, Walker SA, Zoetmulder LC, Vandenbergh PA: Cloning, expression, and nucleotide sequence of genes involved in production of pediocin PA-1, a bacteriocin from Pediococcus acidilactici PAC1.0.

    Appl Environ Microbiol 1992, 58(8):2360-2367.

  25. Anderson DG, McKay LL: Simple and rapid method for isolating large plasmid DNA from lactic streptococci.

    Appl Environ Microbiol 1983, 46:549-552.

  26. BioEdit, biological sequence alignment editor for Win 95/98/NT/2K/XP

  27. Motlagh A, Bukhtiyarova M, Ray B: Complete nucleotide sequence of pSMB 74, a plasmid encoding the production of pediocin AcH in Pediococcus acidilactici.

    Lett Appl Microbiol 1994, 18(6):305-312.

  28. Vandamme P, Pot B, Gillis M, de Vos P, Kersters K, Swings J: Polyphasic taxonomy, a consensus approach to bacterial systematics.

    Microbiol Rev 1996, 60:407-438.

  29. Mora D, Fortina MG, Parini C, Daffonchio D, Manachini PL: Genomic subpopulations within the species Pediococcus acidilactici detected by multilocus typing analysis: relationships between pediocin AcH/PA-1 producing and non-producing strains.

    Microbiology 2000, 146(8):2027-2038.

  30. Miller KW, Ray P, Steinmetz T, Hanekamp T, Ray B: Gene organization and sequences of pediocin AcH/PA-1 production operons in Pediococcus and Lactobacillus plasmids.

    Lett Appl Microbiol 2005, 40:1-56.

  31. Diep DB, Godager L, Brede D, Nes IF: Data mining and characterization of a novel pediocin-like bacteriocin system from the genome of Pediococcus pentosaceus ATCC 25745.

    Microbiology 2006, 152(6):1649-1659.

  32. Simpson PJ, Stanton C, Fitzgerald GF, Ross RP: Genomic diversity within the genus Pediococcus as revealed by randomly amplified polymorphic DNA PCR and Pulsed-Field Gel Electrophoresis.

    Appl Environ Microbiol 2002, 68(2):765-771.

  33. Barros RR, Carvalho MDGS, Peralta JM, Facklam RR, Teixeira LM: Phenotypic and genotypic characterization of Pediococcus strains isolated from human clinical sources.

    J Clin Microbiol 2001, 39(4):1241-1246.

  34. Walter J, Hertel C, Tannock GW, Lis CM, Munro K, Hammes WP: Detection of Lactobacillus, Pediococcus, Leuconostoc, and Weissella species in human feces by using group-specific PCR primers and denaturing gradient gel electrophoresis.

    Appl Environ Microbiol 2001, 67(6):2578-2585.

  35. Goldenberger D, Perschil I, Ritzler M, Altwegg M: A simple "universal" DNA extraction procedure using SDS and proteinase K is compatible with direct PCR amplification.

    PCR Methods Appl 1995, 4:368-370.

  36. Greisen K, Loeffelholz M, Purohit A, Leong D: PCR primers and probes for the 16S rDNA gene of most species of pathogenic bacteria, including bacteria found in cerebrospinal fluid.

    J Clin Microbiol 1994, 32:335-351.


rating: 3.00 from 2 votes | updated on: 12 Dec 2007 | views: 1174 |

Rate article:







excellent!bad…