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Although a huge amount of mammalian genomic data does become publicly available, …


Biology Articles » Bioinformatics » Construction of an open-access database that integrates cross-reference information from the transcriptome and proteome of immune cells » Table 3

Table 3
- Construction of an open-access database that integrates cross-reference information from the transcriptome and proteome of immune cells

Statistics for 2-DE gel-based proteomic analysis

Cell type Cell subset Number of spots quantified Number of protein spots identified

B lymphocyte From spleen, resting 1390 291
  From spleen, stimulated with BAFF, 7 h 1181 289
  From spleen, stimulated with CD40L and anti-CD8, 7 h 1279 288
  From spleen, stimulated with anti-IgM, 7 h 1124 287
  From spleen, stimulated with LPS, 7 h 1067 287
  CH12 cell-line, resting 1255 317
  CH12 cell-line, stimulated with anti-CD40, IL4 and TGFb1, 8 h 1256 297
  CH12 cell-line, stimulated with anti-CD40, IL4 and TGFb1, 48 h 1281 293
  WEHI-231 cell-line, resting 1257 285
  WEHI-231 cell-line, stimulated with anti-IgM, 8 h 1126 282
  WEHI-231 cell-line, stimulated with anti-IgM, 24 h 1228 282
  WEHI-231 cell-line, stimulated with anti-IgM and anti-CD40, 8 h 1223 285
  WEHI-231 cell-line, stimulated with anti-IgM and anti-CD40, 24 h 1060 283
T lymphocyte From spleen, Th1 1003 316
  From spleen, Th2 981 284
  23-1-8 cell-line (Th1 clone) 1055 270
  MS-SB cell-line (Th2 clone) 963 269
Macrophage J774 cell-line, resting 1347 420
  J774 cell-line, stimulated with LPS, 2 h 1494 303
Dendritic cell From bone marrow, resting 1468 369
  From bone marrow, stimulated with LPS, 4 h 1399 292
Epithelial cell From small intestine 990 351
  From Peyer's patches 1074 269

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