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Home » Biology Articles » Cell biology » The cell cycle DB: a systems biology approach to cell cycle analysis » References

- The cell cycle DB: a systems biology approach to cell cycle analysis

  1. Ogata H, Goto S, Sato K, Fujibuchi W, Bono H, Kanehisa M. KEGG: Kyoto encyclopedia of genes and genomes. Nucleic Acids Res (1999) 27:29–34

  2. Vastrik I, D’Eustachio P, Schmidt E, Joshi-Tope G, Gopinath GR, Croft D, De Bono B, Gillespie M, Jassal B, et al. Reactome: a knowledge base of biologic pathways and processes. Genome Biol (2007) 8:R39

  3. Bartlett R, Nurse P. Yeast as a model system for understanding the control of DNA replication in eukaryotes. Bioessays (1990) 12:457–463

  4. Hucka M, et al. The Systems Biology Markup Language (SBML): a medium for representation and exchange of biochemical network models. Bioinformatics (2003) 19:524–531

  5. Le Novere N, Bornstein B, Broicher A, Courtot M, Donizelli M, Dharuri H, Li L, Sauro H, Schilstra M, et al. BioModels Database: a free, centralized database of curated, published, quantitative kinetic models of biochemical and cellular systems. Nucleic Acids Res (2006) 34:D689–D691

  6. Vass MN, Allen CA, Shaffer N, Ramakrishnan LT, Watson, Tyson JJ. The JigCell Model Builder and Run Manager. Bioinformatics (2004) 20:3680–3681

  7. Levene M, Loizou G. Why is the snowflake schema a good data warehouse design? Inf. Syst (2003) 28:225–240

  8. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. Basic local alignment search tool. J. Mol. Biol (1990) 215:403–410

  9. Vermeulen K, Van Bockstaele DR, Berneman ZN. The cell cycle: a review of regulation, deregulation and therapeutic targets in cancer. Cell Prolif (2003) 36:131–149

  10. Milanesi L, Petrillo M, Sepe L, Boccia A, D’Agostino N, Passamano M, Di Nardo S, Tasco G, Casadio R, et al. Systematic analysis of human kinase genes: a large number of genes and alternative splicing events result in functional and structural diversity. BMC Bioinformatics (2005) 6(Suppl. 4):S20.

  11. Sanner MF, Olson AJ, Spehner JC. Reduced surface: an efficient way to compute molecular surfaces. Biopolymers (1996) 38:305–320

  12. Mathematical Markup Language (MathML). Version 2.0 (second edition).

  13. Ermentrout B. Simulating, Analyzing, and Animating Dynamical Systems: A Guide to XPPAUT for Researchers and Students (2002) Philadelphia, USA: SIAM.

  14. Williams T, Kelley C. GNUPLOT: An Interactive Plotting Program, Version 3.7 organized by: David Denholm. (1998) http://www.gnuplot.info/.

  15. Bai S, Goodrich D, Thron CD, Tecarro E, Obeyesekere M. Theoretical and experimental evidence for hysteresis in cell proliferation. Cell Cycle (2003) 2:46–52

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